Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 AlteredExpression group LHGDN However, nuclear beta-catenin expression was significantly greater in MCRA patients' tumours than in sporadic adenomas. 17505512 2007
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group LHGDN Clinical features of familial adenomas polyps in Chinese and establishment of its immortal lymphocyte cell lines. 17569124 2007
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group LHGDN Of MPs and SAs, 72% had either BRAF or KRAS mutation. 16879389 2006
Entrez Id: 324
Gene Symbol: APC
APC
0.400 AlteredExpression group LHGDN Complete loss of APC protein did not influence morphology, location, or appearance of adenomas, nor was it affected by the patient's age. 16804979 2006
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group LHGDN In study II, archived stool samples from patients with advanced adenomas containing known KRAS mutations were assayed, along with controls. 19026650 2009
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker group LHGDN These results suggest that Survivin and p53 may play important roles in the transition from IPMT Adenoma to IPMT CIS. 12794243 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 GeneticVariation group LHGDN Increased risk of colorectal adenomas in Italian subjects carrying the p53 PIN3 A2-Pro72 haplotype. 17374954 2006
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker group LHGDN [Expressions of beta-catenin, p53 and proliferating cell nuclear antigen in the carcinogenesis of colorectal adenoma]. 12515622 2002
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group LHGDN Multiple rare nonsynonymous variants in the adenomatous polyposis coli gene predispose to colorectal adenomas. 18199528 2008
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 Biomarker group LHGDN KRAS transitions and villous growth in colorectal adenomas. 16373972 2005
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker group LHGDN We analyzed the phenotypes, DNA ploidy patterns, and microsatellite regions linked to adenomatous polyposis coli (APC) gene on chromosome 5q of low-grade gastric adenomas/dysplasias, Vienna Category 3, to investigate whether these lesions have the potential to become adenocarcinomas. 17964080 2008
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group LHGDN Associations of Ki-ras proto-oncogene mutation and p53 gene overexpression in sporadic colorectal adenomas with demographic and clinicopathologic characteristics. 16896030 2006
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group LHGDN CTNNB1 mutations were found in 2/19 adenomas without APC mutation. 12737446 2003
Entrez Id: 324
Gene Symbol: APC
APC
0.400 AlteredExpression group LHGDN Cross-species comparison of human and mouse intestinal polyps reveals conserved mechanisms in adenomatous polyposis coli (APC)-driven tumorigenesis. 18403596 2008
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 Biomarker group LHGDN [Expressions of beta-catenin, p53 and proliferating cell nuclear antigen in the carcinogenesis of colorectal adenoma]. 12515622 2002
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 Biomarker group LHGDN P53 gene and Wnt signaling in benign neoplasms: beta-catenin mutations in hepatic adenoma but not in focal nodular hyperplasia. 12297840 2002
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 GeneticVariation group LHGDN CTNNB1 mutations were found in 2/19 adenomas without APC mutation. 12737446 2003
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group LHGDN No mutations of beta-catenin were found in adenocarcinomas, or adenomas/dysplasia without APC mutation. 12163385 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker group LHGDN In conclusion, both bcl-2 and p53 immunohistochemical profiles may be useful adjuncts in detecting adenomas with a malignant potential, whereas bcl-2 could be used in combination with Dukes' stage as a predictor of prognosis in colorectal cancer. 17562177 2008
Entrez Id: 23600
Gene Symbol: AMACR
AMACR
0.360 GeneticVariation group LHGDN Variants in the alpha-Methylacyl-CoA racemase gene and the association with advanced distal colorectal adenoma. 17684125 2007
Entrez Id: 23600
Gene Symbol: AMACR
AMACR
0.360 Biomarker group LHGDN Alpha-methylacyl-CoA racemase as a marker in the differential diagnosis of metanephric adenoma. 16424894 2006
Entrez Id: 6414
Gene Symbol: SELENOP
SELENOP
0.330 GeneticVariation group LHGDN Three SNPs located in the 3' region of SEPP1, which is overlapping with the promoter region of an antisense transcript, were significantly associated with adenoma risk: homozygotes at two SEPP1 loci (31,174 bp 3' of STP A>G and 43,881 bp 3' of STP G>A) were associated with increased adenoma risk [odds ratio (OR), 1.48; 95% confidence interval (95% CI), 1.00-2.19 and OR, 1.53; 95% CI, 1.05-2.22, respectively] and the variant SEPP1 44,321 bp 3' of STP C>T was associated with a reduced adenoma risk (CT versus CC OR, 0.85; 95% CI, 0.63-1.15). 18483336 2008
Entrez Id: 7296
Gene Symbol: TXNRD1
TXNRD1
0.310 GeneticVariation group LHGDN Consistent with the individual SNP results, we observed a significant overall association with adenoma risk for SEPP1 and TXNRD1 (global P = 0.02 and 0.008, respectively) but not for the four GPX genes. 18483336 2008
Entrez Id: 54822
Gene Symbol: TRPM7
TRPM7
0.310 GeneticVariation group LHGDN The relation of magnesium and calcium intakes and a genetic polymorphism in the magnesium transporter to colorectal neoplasia risk. 17823441 2007
Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
0.100 Biomarker group LHGDN None of the 141 normal-population adenoma patients carried biallelic germline MYH variants (95% CI = 0.06-4.1%) and 3 were heterozygotes (2.1%). 14999774 2004